NAME

Bio::KEGGI::pathway

DESCRIPTION

Parse KEGG pathway file (ftp://ftp.genome.jp/pub/kegg/pathway/pathway).

Returned data structure

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$rh_rec = {
    'id'          => $id,
    'name'        => $name,
    'definit'     => $definition,
    'class'       => [ $class, ... ],
    'map'         => $map,
    'module'      => [ $module_id, ... ],
    'disease'     => [ $disease_id, ... ],
    'organism'    => $organism,
    'abbr_org'    => $abbr_org,
    'dblink'      => [
        {
            'db'    => $db,
            'link' => [ $link, ... ],
        },
        ...
    ],
    'gene'        => [
        {
            'entry' => $name,
            'name'  => [ $alt_name, ... ],
            'ko'    => [ $ko, ... ],
            'ec'    => [ $ec, ... ],
        },
        ...
    ],
    'orthology'   => [ $orth_id, ... ],
    'compound'    => [ $compound_id, ... ],
    'pmid'        => [ $pmid, ...],
    'rel_pathway' => [ $rel_pathway_id, ... ],
    'ko_pathway'  => $ko_pathway,
}

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AUTHOR

zeroliu-at-gmail-dot-com

next_rec Name: next_rec Desc: Get next KEGG record Usage: $o_keggi->next_rec() Args: none Return: A KEGG object